Plot spatial correlation of cell type proportions
plt_colocalization.RdPlot spatial correlation of cell type proportions
Arguments
- spatial_obj
an `Seurat` object with a Spatial assay with `deconverse::deconvolute` results
- method
a method to plot. If NULL and only one method ran, that method will be plotted.
- level
a level of annotation to plot. If NULL, the finest level will be plotted.
- min_prop
minimal proportion of a cell type to be considered as occuring in a given spot