CIBERSORTx deconvolution of bulk data using an `screference`

Usage

cibersortx_deconvolute(
  bulk_data,
  scref,
  cache_path = "cibersortx",
  username = NULL,
  token = NULL
)

bulk_data: a matrix of genes-by-samples with bulk mixtures
scref: an object of class `screference`
cache_path: path to cache deconvolution results
username: a username used to authenticate access to CIBERSORTx method. See: https://cibersortx.stanford.edu/getoken.php
token: a token used to authenticate access to CIBERSORTx method
a: tibble with deconvolution fractions